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OffRisk

A docker image for annotating CRISPR off-target sites in the human genome

Gil Ad Barkai, Tal Malul, Yossi Eliaz, Eran Eyal, Isana Veksler-Lublinsky

The CRISPR-Cas9 system has been adapted to achieve targeted genome editing as well as transcriptional control by customizing 20-nt guide RNA (gRNA) molecules for desired regions in the target genome. Designing gRNAs must consider nonspecific and unintended binding, known as off-targets, since these may have potentially harmful effects. To assist in gRNA design, we have developed OffRisk. This Docker-based tool annotates off-target sites in the human genome and assigns them a potential risk label by incorporating functional and regulatory information at different molecular levels.

שפת פרסום אנגלית
כתב עת Bioinformatics Advances
כרך 3
נושא מספר 1
סטטוס פרסום פורסם - 01.01.2023
מספר מאמר vbad138

ASJC Scopus subject areas

Structural Biology
Molecular Biology
Genetics
Computer Science Applications
גישה למסמך
10.1093/bioadv/vbad138
קבצים וקישורים אחרים
Link to publication in Scopus