רמי פוזיס

אקדמי בכיר

ScentChrono

A computational pipeline for floral volatile rhythms and pollinator interactions

Viktoriya Roos, Ibrahim N.A. Salman, Merav Seifan,Vered Tzin,Rami Puzis

Floral scents play a key role in plant–pollinator interactions, shaping visitation by beneficial pollinators and ultimately influencing plant reproductive success. These scents are not static and often follow daily rhythms that create temporal patterns requiring detailed chemical profiling. To capture these dynamics, Gas Chromatography–Mass Spectrometry (GC–MS) is the standard method for analyzing floral volatiles, producing high-resolution and complex datasets. Interpreting such datasets increasingly relies on computational tools. However, most existing approaches do not account for circadian dynamics or background signals when integrating volatile emission patterns with pollinator activity. To address this gap, we developed ScentChrono, a computational pipeline that integrates clustering of volatile features with temporal emission patterns. We tested ScentChrono on Erucaria microcarpa (Brassicaceae), where it outperformed RAMClust, a widely used spectral clustering tool, in sensitivity, precision, and consistency. Targeted analysis identified 18 volatile compounds, while ScentChrono detected 14 compounds that consistently aligned with temporal emission patterns. Of these, 9 compounds including benzaldehyde, methyl benzoate, and benzyl acetate were identified by both approaches and displayed diurnal rhythms, with midday emission peaks matching pollinator activity. Our results demonstrate that ScentChrono captures both floral volatile profiles and their diurnal rhythms, providing a robust framework for understanding how floral chemistry shapes pollinator behavior.

שפת פרסום אנגלית
כתב עת Heliyon
כרך 11
נושא מספר 16
סטטוס פרסום פורסם - 01.11.2025
מספר מאמר e44123

Keywords

Feature clustering
Metabolomics
Pollination ecology
Volatile organic compounds (VOCs)

ASJC Scopus subject areas

General
קבצים וקישורים אחרים
Link to publication in Scopus